We investigate recovery and upcycling of valuable components from biomass using organic supramolecules as extractants and catalysts. In addition, our receptor molecules can bind either harmful or useful anions. The goal is to develop molecular level chemical applications for bio and circular economy.
Overview
Core fields of research
Basic natural phenomena and mathematical thinking
Research areas
Circular Economy
Functional Molecules and Materials
Center of Expertise for Circular Economy
Sustainable society
Faculty
Faculty of Mathematics and Science
Department
Department of Chemistry
Research group description
The research combines organic supramolecular chemistry with strong expertise in chemical analytical techniques to create and investigate functional molecules, their non-covalent complexes and self-assembled structures. Mastering molecular design, synthesis, and molecular level interactions generates fundamental knowledge for many areas of chemistry and material sciences. In addition, we aim to create new applications for bio and circular economy and welcome collaboration with the private sector to bring these ideas alive. Our research focuses on the following research areas.
1) Anion receptors that bind carboxylate and chloride anions
Carboxylate and chloride anions are ubiquitous in nature, thus their recognition has important applications. In the research project MAREXT: Macrocyclic Receptors for Selective Anion Extraction we investigated an calix[4]pyrrole-based anion receptor that has three different binding sites and can bind anion inside or outside of the main cavity, and form ion-pair complexes with organic pyridinium and imidazolium cations. In addition, we synthesized an calix[4]pyrrole anion receptor that switches from open to closed state when the anion binds in the cavity, and remains in the kinetically stable closed state due to suitably rigid structure of the receptor. We also demonstrated that anion receptors appended with urea groups work as artificial chloride transporters, which transport anions through lipid membrane. Artificial chloride transporters are envisioned as a potential cure for impaired chloride channel mediated diseases such as cystic fibrosis, or as anticancer agents.
2) Anion binding foldamers
Foldamers are synthetic oligomers that arrange in special shapes i.e. fold into defined conformation similarly to protein folding from an amino acid chain. Instead of amino acids, composition of foldamers can vary to almost any chemical building block. We have shown that anion binding especially with fluoride and chloride arranges arylamide foldamers in a helical fold. In collaboration with Pihko group we investigate the effect of anion binding into the folding and catalytic activity of thiourea/urea foldamers that catalyse Mannich reaction between imines and malonate esters. The research project COCOA: Control of Catalyst Operation with Anions investigates anions as modulators for catalytic activity of foldamers, and conformational switching by anion binding in aqueous solvents.
3) Micelles and solid lipid nanoparticles containing supramolecular receptors
When supramolecular receptors have an amphiphilic structure (i.e.) polar and non-polar parts, they can self-assemble into micelles or form solid lipid nanoparticles. These nanoscale structures have wide range of applications in extraction and sensing, molecular transport, drug delivery, or in catalysis. We have shown that new types of supramolecular receptors such as resorcinarenes and calix[4]pyrroles can form solid lipid nanoparticles. Currently we are investigating micelles and co-micelles of calixarene-type receptors for extraction of anions and as organocatalysts in biomass valorization.
4) Bioactive compounds from wild plants and biomass
In this new project we investigate extraction methods for recovery of bioactive compounds from biomass and prepare supramolecular complexes with bioactive molecules to improve the antiviral and antibacterial efficiency of plant extracts.
Research methods
Organic synthesis, especially calix[4]pyrroles, calix[n]arenes and resorcinarenes, and occasionally small organic molecules.
Organic analytical chemistry, including chromatographic techniques for separation, purification and characterization, NMR-spectroscopy for structural elucidation (1D, 2D, VT-NMR), other spectroscopic techniques including UV-VIS, IR and fluorescence spectroscopy.
X-ray crystallography of organic receptors and their supramolecular complexes with single crystal X-ray crystallography.
Dynamic light scattering (DLS) for nanoparticle size, monodispersity and zetapotential analysis.
NMR spectroscopy and isothermal titration calorimetry (ITC) for determination of binding constants and thermodynamic stability of supramolecular complexes.
Computational methods, i.e. density functional theory (DFT) calculations for supramolecular complexes (Gaussian, Turbomole, GPAW – in collaboration with computational groups)
We also utilize occasionally nanoscale imaging techniques (AFM, SEM, TEM), via in-house collaboration.
Combiflash at synthesis laboratory
Highlights and news
The cis isomer of a calix[4]pyrrole bearing two urea-functionalized arms wraps around a chloride anion and shows 10 times higher transport activity into liposomes than the corresponding trans isomer, which can only use one arm for anion binding.
Chloride, acetate and benzoate anions are kinetically trapped between the straps within the cavity of a doubly strapped calix[4]pyrrole receptor. The host switches conformation similarly to a Venus flytrap capturing an insect.
The cis isomer of a calix[4]pyrrole bearing two urea-functionalized arms wraps around a chloride anion and shows 10 times higher transport activity into liposomes than the corresponding trans isomer, which can only use one arm for anion binding. Org. Biomol. Chem. 2023 21, 6595-6603.
2022
Chloride, acetate and benzoate anions are kinetically trapped between the straps within the cavity of a doubly strapped calix[4]pyrrole receptor. The host switches conformation similarly to a Venus flytrap capturing an insect. Eur. J. Org. Chem., 2022, e202200647, Cover Feature
Research Assistant Afra Pazhouhan Fekri, B.Sc. 07/2019-10/2019
Julia Naulapää, M.Sc., Water soluble calixarenes, resorcinarenes and calixpyrroles 04/2023
Riina Ahomaa, B.Sc. Bioactive naphthoquinones (in Finnish) 05/2024
Henni Moisio, B.Sc. Polyphenols of edible berries and their health effects (in Finnish) 05/2024
Anniina Vierikko, B.Sc. Platform chemicals from lignocellulosic biomass (in Finnish) 05/2024
Niina Roiko-Jokela, B.Sc. Environmental applications of supramolecular gels (in Finnish) 04/2024
Julia Naulapää, B.Sc., Phosphate complexes of calix[4]pyrroles 11/2020
Events
2024
Chemical Solutions for Biological Challenges, Turku, Finland 10.-12.6.
Jyväskylä team participated CSBC2024, a joint meeting of pharmaceutical sciences, NMR spectroscopy, and mass spectrometry with synthetic and medicinal chemistry. Two oral presentations were given by Dr. Riikka Kuosmanen: Recovery of xanthates from mining effluents and Dr. Teppo Leino: Hypersensitive inhibition of organocatalysts by halide salts.